A Mini-Symposium on the Biophysics of Human Chromosome
February 05 (Mon), 2018 ~ February 07 (Wed), 2018
■ Program

     

     Feb. 4

     Feb. 5

     Feb. 6

     Feb. 7

    8:00-9:00

     

     

    Coffee & Sandwich

    Coffee & Sandwich

    Coffee & Sandwich

    9:00-9:15 Ian DoddHajin Kim

    9:15-9:30 

    welcome

    9:30-10:00

    Angelo Rosa

    Ralf Metzler

    Chanbong Hyeon

     10:00-10:30

    Takahiro Sakaue

    Jae-Hyung Jeon

     10:30-10:45

    Olga Dudchenko

    Coffee
     10:45-11:00Xavier Durang 

     11:00-11:15

     CoffeeCoffee

     11:15-11:45

    Olga Dudchenko
    Per Stenberg 

    Markus Nyberg

     11:45-12:15

    Sang Hoon Lee Tetsuya YamamotoFree discussion

     12:15-14:00

    Lunch Lunch
    Lunch

     14:00-14:30

    Shin-ichi tate Angelo Rosa 14:00~ Excursion
     14:30-15:00Simone Pigolotti
     15:00-15:15 CoffeeCoffee
     15:15-15:45Jan SmrekJong-Bong Lee
     15:45-16:15Michael Lomholt
     16:15-16:30Jejoong YooCoffee
     16:30-16:45Ludvig Lizana
     16:45-17:00Coffee
     17:00-17:30Changyong SongJan Smrek
     18:00~20:00
    Pre-conference 
    dinner
    Poster session 

    with pizza and beer

    Conference dinner 


    Lecture

    Olga Dudchenko (Baylor College of Medicine, USA)

    Introduction to Hi-C


    Ralf Metzler (Potsdam University, Germany)

    From facilitated diffusion to Levy flights (PDF)


    Angelo Rosa (SISSA, Italy)  

    The basics and history of the fractal/crumpled globule model for the large-scale chromatin folding/organisation (PPT)


    Jan Smrek (Max-Planck Institute for Polymer Research, Germany)

    Chromatin organisation and (non-)equilibrium phase separation (PDF)


    Seminar

    Ian Dodd (University of Adelaide, Australia)

    Using gene regulation to measure DNA looping and loop-loop interactions in E.coli


    Xavier Durang (University of Seoul, Korea)

    First passage time of a Brownian and fractional Brownian motion with resetting


    Changbong Hyeon (KIAS, Korea)

    Architecture of human interphase chromosome determines the dynamical properties of chromatin loci in space and time


    Jae-Hyung Jeon (POSTECH, Korea)

    Molecular diffusion in fractal globule


    Hajin Kim (UNIST, Korea)

    Visualizing and tracking chromosomal loci in live cells


    Jong-Bong Lee (POSTECH, Korea)

    Stochastic control of DNA mismatch repair


    Sang Hoon Lee (KIAS, Korea)

    Finding higher-order interactions in human chromosomes


    Ludvig Lizana (Umeå University, Sweden)

    Navigation and Search on Human Chromosomes


    Michael Lomholt (University of Southern Denmark, Denmark)

    DNA conformational dynamics and effects on protein target search


    Markus Nyberg (Umeå University, Sweden)

    Brownian motion with drift and resetting in a finite interval - Phase transitions and critical points


    Simone Pigolotti (Okinawa Institute of Science and Technology, Japan)

    Energetic funnel facilitates facilitated diffusion


    Angelo Rosa (SISSA, Italy)  

    The role of topological constraints in genome folding & crumpling of ring polymers in melt (PPT)


    Takahiro Sakaue (Kyushu University, Japan)

    Statistical physics of topologically constrained polymers


    Jan Smrek (Max-Planck Institute for Polymer Research, Germany)

    Facilitated diffusion of proteins through fractal DNA globules


    Changyong Song (POSTECH, Korea)

    X-ray human chromosome structure.


    Per Stenberg (Umeå University, Sweden)

    Unfolding mitotic chromosomes – the origin of 3D compartments?


    Schi-ichi Tate (Hiroshima University, Japan)

    Chromatin structure and dynamics in fission yeast


    Tetsuya Yamamoto (Nagoya University, Japan)

    Osmotic mechanism of loop extrusion process


    Jejoong Yoo (POSTECH IBS, Korea)

    Epigenetically controlled free energy landscape and phase behavior of DNA and chromatin revealed by multi-scale simulations and experiments


    Poster session

    Dohyung Cho (POSTECH, Korea)

    Single particle imaging using X-ray Free Electron Laser


    Sungmin Joo (POSTECH, Korea)

    First passage dynamics of fractional Brownian motion with stochastic resetting: a computational study


    Chulho Jung (POSTECH, Korea)

    Cryogenic imaging of biological specimen using coherent X-ray source


    Yeonghoon Kim (POSTECH, Korea)

    Obstructed diffusion in fractal globules and in other random geometries


    O-chul Lee (POSTECH, Korea)

    2-D Self-Assemblies and Shape Transitions: A Critical Role of Defect Fluctuations.


    Lei Liu (KIAS, Korea)

    From Octopus to Dendrite - Semiflexible Polyelectrolyte Brush condensed in Trivalent Counterion Solution